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Is there a way to automate manual payments and applying them to open invoices?

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We have an existing process (using integration manager) to post invoices into open payables.  We are exploring using ACH as a payment method rather than cutting checks.  I have googled and searched here, but I cannot find any information on how I might automate the other half of the transaction.

Once we ACH and receive confirmation, is there any way (integration,econnect, etc...) to import these transactions and apply them to the invoices we had already posted to open A/P?  I believe it would be a manual payment when doing this through the user interface, but it seems this isn't an option in econnect or integration manager.

I have been successful in doing a payment via integration manager and adding a check number.  This effectively skips open AP.  This is fine in some cases, but in most cases we will need to let things sit in open AP for some time.

We are running GP 10 with SQL server 2008. 

Any help would be appreciated?  I've got to think this has been encountered before. 


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